CF Neuro
The solution of neuroscience-focused core facilities
 

The CF Neuro package is designed for facilities and labs with a strong focus on neuroscience research. The CF Neuro package includes everything from the CF Go package (Base, 2D, 3D and machine learning object classifier) plus the Aivia Neuro package for ultrafast automatic neuron tracing and spine analysis. You can edit the dendritic network results using the Object Editor tool. Extend the analysis by leveraging Aivia's pre-trained neuron classifier for neuron object classification. The CF Neuro package also includes two (2) additional standard recipes and one (1) custom analysis recipe plus three (3) years of technical support and software upgrades.

 

 

Included Modules
  • Includes everything in CF Go (Base, 2D, 3D, object classifier)
  • Ultrafast automatic neuron tracing with optional spine analysis
  • Intuitive Dendrite Pencil and Object Editor tool for manual tracing
  • Neuron-specific measurements for classifying neuron type
  • Includes two (2) additional standard recipes and one (1) custom recipe
  • Three (3) years of technical support plus software updates included

Features

The backbone of all Aivia packages. It features high performance volume and surface rendering engines capable of handling even the most demanding (multi-terabyte, multi-channel time series) microscopy datasets. It offers a wide range of visualization models which enables you to explore your data. Basic quantitative options such as Measurement, Spreadsheet, Charts and Annotations are also included with Aivia Base.

Aivia Base

Aivia 2D is an impressive collection of tools for the most common 2D applications. The package includes analysis pipelines ("recipes") for object detection and tracking for fluorescence and phase contrast microscopy images. Select recipes include pre-taught machine learning image enhancement filters to greatly improve image quality for analysis. Editing of the analysis results is possible with the built-in Outline Editor (for objects) and Track Editor (for tracks). This enables you to get to 100% accuracy on the analysis results when critical.

2D Count + Tracking

Aivia 3D provides automated analysis pipelines ("recipes") for object detection and tracking in 3D microscopy images. The recipes use the latest image segmentation algorithm to detect and partition objects based on intensity, size and shape of the object. The tracking recipe tracks object motion over time and automatically detects lineages using an innovative dual-score track matching algorithm based on object motion and intensity. The analysis results are rendered almost instantaneously in 3D view; allowing you to interact with selected objects without interruptions.

3D Count + Tracking

Aivia Neuro gives you the fastest automated neuron tracing performance. You can trace dendritic networks in seconds for the most common imaging conditions (with and without visible soma). Extend your analysis further with automatic spine detection included with the recipe. Additionally, Aivia gives you the option to edit the detection results using the Neuron Editor with its intuitive Neuron Pencil tool for tracing missing dendrites and one-click spine creation tool.

3D Neuron

You can train a machine learning model to distinguish objects of interest from background. The Pixel Classifier provides a powerful way to detect objects in images where conventional threshold-based methods are not enough.

Pixel Classifier

The machine learning object classifier allows you to train Aivia to look for specific phenotypes present in your analysis data. Whether you are applying one of the pre-trained classifiers or making one from scratch, Aivia's machine learning approach gives you access to the full wealth of information contained within each object and measurement. You can even discover new phenotypes in your data with Novelty Detection.

Machine Learning Object Classifier

Compare CF Packages

 

Explore Other CF Packages

CF Overview

CF Go

CF Pro

 
 

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